illustration of DNA strand and abstract shapes on a computer screen on a green gradient background

Medical, health, and genomics

Digital pathology helps decode tumor microenvironments for precision immunotherapy. GigaPath is a novel vision transformer that can scale to gigapixel whole-slide images by adapting dilated attention for digital pathology. In joint work with Providence and UW, we’re sharing Prov-GigaPath, the first whole-slide pathology foundation model pretrained on large-scale real-world data, for advancing clinical research and discovery.

GigaPath: Whole-Slide Foundation Model for Digital Pathology

Research Forum Ep2 | Panel | Transforming the Natural Sciences with AI

Research Forum 2 | Panel Discussion: Transforming the Natural Sciences with AI

white icons of first aid kit, DNA strand, laptop monitor with overlapping eye, and microscope on a blue and green gradient background

Scaling early detection of esophageal cancer with AI

female doctor / nurse reviewing a tablet

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Publication

SmartKC: Smartphone-based Corneal Topographer for Keratoconus Detection

Siddhartha Gairola, Murtuza Bohra, Nadeem Shaheer, Navya Jayaprakash, Pallavi Joshi, Anand Balasubramaniam, Kaushik Murali, Nipun Kwatra, Mohit Jain

IMWUT | October 2021, Vol 5(4)

Video Project Project

Publication

Infrastructuring Telehealth in (In)Formal Patient-Doctor Contexts

Karthik S Bhat, Mohit Jain, Neha Kumar

CSCW 2021 | October 2021

Honorable Mention Award

Project

Publication

Exploring the Regulatory Function of the N-terminal Domain of SARS-CoV-2 Spike Protein through Molecular Dynamics Simulation

Yao Li, Tong Wang, Juanrong Zhang, Bin Shao, Haipeng Gong, Yusong Wang, Xinheng He, Siyuan Liu, Tie-Yan Liu

Advanced Theory and Simulations | September 2021

"Top Downloaded Article" Award, Cover Story

Project

Publication

Collaboration between Government and Research Community to Respond to COVID-19: Israel’s Case

Mor Peleg, Amnon Reichmann, Sivan Shachar, Tamir Gadot, Meytal Avgil Tsadok, Maya Azaria, Orr Dunkelmann, Shiri Hassid, Daniella Partem, Maya Shmailov, Elad Yom-Tov, Roy Cohen

Journal of Open Innovation | September 2021

Project Project

Publication

MM-Deacon: Multimodal molecular domain embedding analysis via contrastive learning

Zhihui Guo, Pramod Kumar Sharma, Liang Du, Robin Abraham

ACL 2022 | September 2021

Project

Tool

This repository contains a setup for running a distributed deployment of the Gadgetron in a Kubernetes cluster. The setup has been developed for and tested with Azure Kubernetes Service (AKS) but should work on other…

GitHub

Publication

Modular Self-Supervision for Document-Level Relation Extraction

Sheng Zhang, Cliff Wong, Naoto Usuyama, Sarthak Jain, Tristan Naumann, Hoifung Poon

2021 Empirical Methods in Natural Language Processing | September 2021

Publication

fastMRI+: Clinical Pathology Annotations for Knee and Brain Fully Sampled Multi-Coil MRI Data

Ruiyang Zhao, Burhaneddin Yaman, Yuxin Zhang, Russell Stewart, Austin Dixon, Florian Knoll, Zhengnan Huang, Yvonne W. Lui, Michael Hansen, Matthew P. Lungren

arXiv: Computer Vision and Pattern Recognition | September 2021, Vol arXiv:2109.03812

Github Project

Tool

fastMRI+

The purpose of this project is to release a set of clinically relevant labels for an existing, publicly available dataset (https://fastmri.org). With permission from the fastMRI team at NYU, we have engaged third party labelers…

GitHub Publication

Publication

Synthetic Circuit-Driven Expression of Heterologous Enzymes for Disease Detection

Jiang He, Lior Nissim, Ava P. Soleimany, Adina Binder-Nissim, Heather E. Fleming, Timothy K. Lu, Sangeeta N. Bhatia

ACS Synthetic Biology | August 2021, Vol 10(9): pp. 2231-2242

Medical, health, and genomics

GigaPath: Whole-Slide Foundation Model for Digital Pathology

Research Forum 2 | Panel Discussion: Transforming the Natural Sciences with AI

Scaling early detection of esophageal cancer with AI

Microsoft Health Futures

SmartKC: Smartphone-based Corneal Topographer for Keratoconus Detection

Infrastructuring Telehealth in (In)Formal Patient-Doctor Contexts

Exploring the Regulatory Function of the N-terminal Domain of SARS-CoV-2 Spike Protein through Molecular Dynamics Simulation

Collaboration between Government and Research Community to Respond to COVID-19: Israel’s Case

MM-Deacon: Multimodal molecular domain embedding analysis via contrastive learning

Gadgetron Azure

Modular Self-Supervision for Document-Level Relation Extraction

fastMRI+: Clinical Pathology Annotations for Knee and Brain Fully Sampled Multi-Coil MRI Data

fastMRI+

Synthetic Circuit-Driven Expression of Heterologous Enzymes for Disease Detection

Medical, health, and genomics

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